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RAPIDR (version 0.1.1)

Reliable Accurate Prenatal non-Invasive Diagnosis R package

Description

Package to perform non-invasive fetal testing for aneuploidies using sequencing count data from cell-free DNA

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Version

Install

install.packages('RAPIDR')

Monthly Downloads

6

Version

0.1.1

License

GPL-3

Maintainer

Kitty Lo

Last Published

November 20th, 2014

Functions in RAPIDR (0.1.1)

makeGCContentData

makeGCContentData
createReferenceSetFromCounts

createReferenceSetFromCounts
writeCleanedCountsFile

writeCleanedCountsFiles
print.rapidr.ref

print.rapidr.ref
ReadBed

ReadBed
writeResultsToFile

writeResultsToFile
testUnknowns

testUnknowns
makeBinnedCountsFile

makeBinnedCountsFile
gcContent

gcContent in 20kb bins
plotTestSample

plotTestSample
evalPerformance

evalPerformance
BinBam

BinBam
outcomes

set of simulated outcomes data
print.rapidr.test

print.rapidr.test
makeGCContentPerPos

makeGCContentPerPos
BinBam.gcCorrect

BinBam.gcCorrect