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RAPIDR (version 0.1.1)
Reliable Accurate Prenatal non-Invasive Diagnosis R package
Description
Package to perform non-invasive fetal testing for aneuploidies using sequencing count data from cell-free DNA
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Version
Version
0.1.1
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Install
install.packages('RAPIDR')
Monthly Downloads
21
Version
0.1.1
License
GPL-3
Maintainer
Kitty Lo
Last Published
November 20th, 2014
Functions in RAPIDR (0.1.1)
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makeGCContentData
makeGCContentData
createReferenceSetFromCounts
createReferenceSetFromCounts
writeCleanedCountsFile
writeCleanedCountsFiles
print.rapidr.ref
print.rapidr.ref
ReadBed
ReadBed
writeResultsToFile
writeResultsToFile
testUnknowns
testUnknowns
makeBinnedCountsFile
makeBinnedCountsFile
gcContent
gcContent in 20kb bins
plotTestSample
plotTestSample
evalPerformance
evalPerformance
BinBam
BinBam
outcomes
set of simulated outcomes data
print.rapidr.test
print.rapidr.test
makeGCContentPerPos
makeGCContentPerPos
BinBam.gcCorrect
BinBam.gcCorrect