RBMRB (version 2.1.7)

chemical_shift_hist_res: Plots chemical shift distribution of all atoms of a given amino acid

Description

Plots the histogram (or) density of chemical shift distribution of all atoms of a given amino acid (or) nucleic acid from BMRB database.

Usage

chemical_shift_hist_res(
  res = "*",
  type = "count",
  cutoff = 8,
  interactive = TRUE
)

Arguments

res

residue name in NMR-STAR atom nomenclature ; Example: ALA,GLY

type

count ; other than count will assume density plot

cutoff

values not with in the cutoff time standard deviation from both sides ofthe mean will be excluded from the plot;default value 8

interactive

TRUE/FALSE default TRUE

Value

R plot object

See Also

fetch_res_chemical_shifts,filter_residue and chem_shift_corr and atom_chem_shift_corr

Examples

# NOT RUN {
#plt<-chemical_shift_hist_res('ALA')
#plots the histogram of all atoms of ALA
#plt<-chemical_shift_hist('GLY',type='density')
#plots the density plot
# }