RChronoModel (version 0.1)

SuccessionPlot: Density Plots of two successive phases (for phases in temporal order constraint)

Description

Plot of the densities of two successive phases and several summary statistics statistics (mean, CI, HPDR)

Usage

SuccessionPlot(Phase1Beginning_chain, Phase1End_chain, Phase2Beginning_chain,
  Phase2End_chain, level = 0.95,
  title = "Phases marginal posterior densities", GridLength = 1024)

Arguments

Phase1Beginning_chain

numeric vector containing the output of the MCMC algorithm for the beginning of the oldest phase

Phase1End_chain

numeric vector containing the output of the MCMC algorithm for the end of the oldest phase

Phase2Beginning_chain

numeric vector containing the output of the MCMC algorithm for the beginning of the following phase

Phase2End_chain

numeric vector containing the output of the MCMC algorithm for the end of the following phase

level

probability corresponding to the level of confidence

title

title of the graph

GridLength

length of the grid used to estimate the density

Value

• Plot of the densities of two successive phases

Examples

data(Phases); attach(Phases)
  SuccessionPlot(Phase.1.alpha, Phase.1.beta, Phase.2.alpha, Phase.2.beta, 0.95)