RDRToolbox v1.16.0

A package for nonlinear dimension reduction with Isomap and LLE.

A package for nonlinear dimension reduction using the Isomap and LLE algorithm. It also includes a routine for computing the Davis-Bouldin-Index for cluster validation, a plotting tool and a data generator for microarray gene expression data and for the Swiss Roll dataset.

Functions in RDRToolbox

Name Description
Isomap Isomap
LLE Locally Linear Embedding
plotDR Plotting tool for two and three dimensional data
generateData Simulator for gene expression data
DBIndex Davis-Bouldin-Index
SwissRoll The Swiss Roll dataset
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Type Package
Date 2014-03-26
License GPL (>= 2)
LazyLoad yes
biocViews DimensionReduction, FeatureExtraction, Visualization, Clustering, Microarray

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