REMixed (version 1.1.2)

plotCalibration: Calibration plot

Description

Calibration plot

Usage

plotCalibration(
  fit,
  legend.position = "none",
  trueValue = NULL,
  criterion = BICc,
  dismin = TRUE
)

Value

Calibration plot, over the lambda.grid.

Arguments

fit

fit object of class cvRemix, from cv.remix.

legend.position

(default NULL) the default position of legends ("none", "left", "right", "bottom", "top", "inside").

trueValue

(for simulation purpose) named vector containing the true value of regularization parameter.

criterion

function ; which criterion among 'BIC', 'eBIC', 'AIC', 'BICc', or function of cvRemix object to take into account (default : BICc).

dismin

logical ; if minimizers of information criterion should be display.

See Also

remix, cv.remix.

Examples

if (FALSE) {
project <- getMLXdir()

ObsModel.transfo = list(S=list(AB=log10),
                        linkS="yAB",
                        R=rep(list(S=function(x){x}),5),
                        linkR = paste0("yG",1:5))

alpha=list(alpha0=NULL,
           alpha1=setNames(paste0("alpha_1",1:5),paste0("yG",1:5)))

y = c(S=5,AB=1000)

res = cv.remix(project = project,
               dynFUN = dynFUN_demo,
               y = y,
               ObsModel.transfo = ObsModel.transfo,
               alpha = alpha,
               selfInit = TRUE,
               eps1=10**(-2),
               ncores=8,
               nlambda=8,
               eps2=1)

plotCalibration(res)

plotIC(res)
}