propTrueNullByLocalFDR

Estimate proportion of NULL p-values. Based on .propTrueNullByLocalFDR in limma: Linear Models for Microarray Data
written by Belinda Phipson and Gordon Smyth

CATS

Sets a significance level for Random Forest MDI (Mean Decrease in Impurity, Gini or
sum of squares) variable importance scores, using an empirical Bayes approach.
See Dunne et al. (2022) <doi:10.1101/2022.04.06.487300>.

Robert Dunne

RFlocalfdr

Significance Level for Random Forest Impurity Importance Scores

propTrueNullByLocalFDR function

<dl><dt>p</dt>
<dd>probabilities</dd></dl>

Arguments

propTrueNullByLocalFDR — propTrueNullByLocalFDR

<dl>

<dt>p</dt>
<dd>probabilities</dd>

</dl>

propTrueNullByLocalFDR: propTrueNullByLocalFDR

Description

Usage

Value

Arguments