regulate_regulon_size

We control the size of the regulon for each TF by using a heuristic to remove the edges whose weights are small

Provides an implementation of Regularized LS-TreeBoost & LAD-TreeBoost algorithm for Regulatory Network inference from any type of expression data (Microarray/RNA-seq etc).

Raghvendra Mall

RGBM

LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network
Reconstruction

Khalid Kunji

Melissa O'Neill

regulate_regulon_size function

<dl> <dt>A</dt>
<dd>Inferred GRN in the form of Ntfs-by-Ntargets matrix</dd></dl>

Arguments

Raghvendra Mall &lt;rmall@hbku.edu.qa&gt;

Author

Regulate the size of the regulon for each TF — regulate_regulon_size

<dl>

 <dt>A</dt>
<dd>Inferred GRN in the form of Ntfs-by-Ntargets matrix</dd>

</dl>

regulate_regulon_size: Regulate the size of the regulon for each TF

Description

Usage

Value

Arguments

Author