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RGalaxy (version 1.16.2)

Make an R function available in the Galaxy web platform

Description

Given an R function and its manual page, make the documented function available in Galaxy.

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Version

Version

1.16.2

License

Artistic-2.0

Maintainer

Bioconductor Package Maintainer

Last Published

February 15th, 2017

Functions in RGalaxy (1.16.2)

addTwoNumbers

Add two numbers
anotherTestFunction

Add two matrices
addTwoNumbersWithTest

Add two numbers (with functional test)
GalaxyClasses

Galaxy Parameter Classes
GalaxyInputFile-class

Class "GalaxyInputFile"
GalaxyConfig-class

Class "GalaxyConfig"
galaxy

Make a function available in Galaxy
functionToGalaxify

Add two matrices
foo

a foo function
GalaxyOutput-class

Class "GalaxyOutput"
probeLookup

Get the PFAM and SYMBOL names for a set of Affymetrix probe IDs
getFriendlyName

Change a camelCase name to a friendlier version
RserveConnection-class

Class "RserveConnection"
gmessage

Sends informational, warning, and error messages to the user.
testFunctionWithGalaxySelectParam

A variation on functionToGalaxify that takes a multiple-choice option using the GalaxySelectParam class.
runFunctionalTest

Run the functional test associated with a function.
testFunctionWithSelect

A variation on functionToGalaxify that takes a multiple-choice option.