RNAsmc (version 0.6.0)

externalLoopsPlot: A function for bulge loops plotting

Description

Given a RNA secondary structure,it compute external loops in the RNA secondary structure and plots the RNA secondary structure

Usage

externalLoopsPlot(ctFile)

Arguments

ctFile

A RNA secondary structure file in CT format

Value

Return a list containing base positions in external loops and plot the given RNA secondary

Examples

# NOT RUN {
###
data(DataRNAstr)
externalLoopsPlot(DataRNAstr)
# }