RNAsmc (version 0.6.0)

getCompare: Internal function for getting similarity score in a RNA secondary structure

Description

Given a substructure list,it compute similarity score of give RNA structures

Usage

getCompare(subStrList)

Arguments

subStrList

A list comprised by the return of function getSubStr

Value

Return a similarity score

Examples

# NOT RUN {
##########
data(DataCluster1)
data(DataCluster2)
data(DataCluster3)
data(DataCluster4)
subStrList <- list(substr1 = getSubStr(DataCluster1),
                   substr2 = getSubStr(DataCluster2),
                   substr3 = getSubStr(DataCluster3),
                   substr4 = getSubStr(DataCluster4))
getCompare(subStrList)
# }