RNAsmc (version 0.6.0)

hairpin_loop: Internal function for getting hairpin loops

Description

Given a RNA secondary structure,it compute hairpin loops in the RNA secondary structure

Usage

hairpin_loop(ctFile)

Arguments

ctFile

A RNA secondary structure file containing structure information

Value

Return a list containing base positions in hairpin loops,and the length of the number of hairpin loops

Examples

# NOT RUN {
###
data(DataRNAstr)
hairpin_loop(DataRNAstr)
# }