RNAsmc (version 0.6.0)

internal_loop: Internal function for getting internal loops

Description

Given a RNA secondary structure,it compute internal loops in the RNA secondary structure

Usage

internal_loop(ctFile)

Arguments

ctFile

A RNA secondary structure file containing structure information

Value

Return a list containing base positions in internal loops,and the length of the number of internal loops

Examples

# NOT RUN {
###
data(DataRNAstr)
internal_loop(DataRNAstr)
# }