RPANDA (version 2.0)

PhenotypicADiag-class: Class "PhenotypicADiag"

Description

A subclass of the PhenotypicModel class, intended to represent models of phenotypic evolution with a "A" matrix diagonalizable.

Objects from the Class

Objects can be created by calls of the form new("PhenotypicADiag", ...).

Slots

name:

Object of class "character" ~~

period:

Object of class "numeric" ~~

aAGamma:

Object of class "function" ~~

numbersCopy:

Object of class "numeric" ~~

numbersPaste:

Object of class "numeric" ~~

initialCondition:

Object of class "function" ~~

paramsNames:

Object of class "character" ~~

constraints:

Object of class "function" ~~

params0:

Object of class "numeric" ~~

tipLabels:

Object of class "character" ~~

tipLabelsSimu:

Object of class "character" ~~

comment:

Object of class "character" ~~

Extends

Class "'>PhenotypicModel", directly.

Methods

getTipDistribution

signature(object = "PhenotypicADiag"): ...

References

Manceau M., Lambert A., Morlon H. (2017) A unifying comparative phylogenetic framework including traits coevolving across interacting lineages Systematic Biology, and the associated Supplementary material.

Examples

# NOT RUN {
showClass("PhenotypicADiag")
# }