RRNA (version 1.0)

RRNA-package: RNA secondary structure ploting

Description

Set of functions for creating and manipulating RNA secondary structure plots from CT files or bracket notations.

Details

Package:

RRNA

Type:

Package

Version:

1.0

Date:

2015-07-27

License:

GPL-3

Examples

### Create a CT file from bracket notation
ct=makeCt("(((...(((...)))...(((...)))...)))","AAAUUUCCCAAAGGGUUUAAAGGGUUUCCCUUU")
coord=ct2coord(ct)
RNAPlot(coord,hl=c("GGGUUU","AAAUUU"),seqcols=c(2,4),labTF=TRUE)