DataApes

Geometric morphometrics shape data regarding Apes' facial
 skeleton and Apes phylogentic trees (<cite>Profico et al. 2017</cite>).

RRphylo

Functions for phylogenetic analysis (Castiglione et al, 2018 <doi:10.1111/2041-210X.12954>). The functions perform the estimation of phenotypic evolutionary rates, identification of phenotypic evolutionary rate shifts, quantification of direction and size of evolutionary change in multivariate traits, the computation of ontogenetic shape vectors and test for morphological convergence.

Pasquale Raia

Phylogenetic Ridge Regression Methods for Comparative Studies

DataApes function

A list containing:<dl class="dl-horizontal">
<dt>$PCstage</dt><dd>A data frame
 containing 38 shape variables for Apes' facial skull at different
 ontogenetic stages</dd>. <dt>$PCadult</dt><dd>A data frame containing 3
 shape variables for Apes' facial skull</dd>.
 <dt>$Tstage</dt><dd>Phylogenetic tree of Apes including the different
 ontogenetic stages of each species as polytomies</dd>.
 <dt>$Tadult</dt><dd>Phylogenetic tree of Apes</dd>.
 <dt>$CentroidSize</dt><dd>numeric vector of Centroid Size values of
 &#8216;PCstage&#8217;</dd>. </dl>

Format

Example dataset — DataApes

A list containing:<dl class='dl-horizontal'>
<dt>$PCstage</dt><dd>A data frame
 containing 38 shape variables for Apes' facial skull at different
 ontogenetic stages</dd>. <dt>$PCadult</dt><dd>A data frame containing 3
 shape variables for Apes' facial skull</dd>.
 <dt>$Tstage</dt><dd>Phylogenetic tree of Apes including the different
 ontogenetic stages of each species as polytomies</dd>.
 <dt>$Tadult</dt><dd>Phylogenetic tree of Apes</dd>.
 <dt>$CentroidSize</dt><dd>numeric vector of Centroid Size values of
 &#8216;PCstage&#8217;</dd>. </dl>

DataApes: Example dataset

Description

Usage

Arguments

Format

References