`install.packages('RVAideMemoire')`

5,302

0.9-83-2

GPL-2

August 23rd, 2023

MVA.cmv

Cross model validation

MVA.anova

Type II permutation test for constrained multivariate analyses

MVA.cor

Correlations of multivariate analyses

MVA.cv

Cross validation

MVA.biplot

Biplot of multivariate analyses

MVA.corplot

Correlation circle of multivariate analyses

MVA.pairplot

Paired plot of multivariate analyses

MVA.plot

Plotting of multivariate analyses

MVA.load

Loadings of multivariate analyses

MVA.loadplot

Loading plot of multivariate analyses

PLSDA.VIP

Variable Importance in the Projection (VIP)

back.emmeans

Back-transformation of EMMeans

MVA.test

Significance test based on cross (model) validation

MVA.synt

Synthesis quality of multivariate analyses

MVA.scores

Scores of multivariate analyses

RVAideMemoire-package

Testing and Plotting Procedures for Biostatistics

adonis.II

Type II permutation MANOVA using distance matrices

MVA.scoreplot

Score plot of multivariate analyses

OR.multinom

Odds-ratio (multinomial regression)

chisq.bin.exp

Expected counts for comparison of response probabilities to given values

MVA.trajplot

Trajectory plot of multivariate analyses

byf.mqqnorm

QQ-plot for factor levels

cdf.discrete

Cumulative Distribution Function of a known discrete distribution

chisq.bintest

Pearson's Chi-squared test for binary variables

bootstrap

Bootstrap

byf.hist

Histogram for factor levels

chisq.theo.bintest

Pearson's Chi-squared test for comparison of response probabilities to given values

chisq.multcomp

Pairwise comparisons after a chi-squared goodness-of-fit test

coord.proj

Coordinates of projected points

cond.multinom

Condition number of the Hessian matrix of a multinomial log-linear model

byf.shapiro

Shapiro-Wilk test for factor levels

cor.2comp

Comparison of 2 Pearson's linear correlation coefficients

byf.qqnorm

QQ-plot for factor levels

cor.multcomp

Comparison of several Pearson's linear correlation coefficients

chisq.exp

Expected counts for comparison of proportions to given values

cor.conf

Equality of a Pearson's linear correlation coefficient to a given value

dendro.gp

Dendrogram and number of groups to be chosen

cov.test

Significance test for the covariance between two datasets

cox.resid

Martingale residuals of a Cox model

fisher.bintest

Fisher's exact test for binary variables

mshapiro.test

Shapiro-Wilk multivariate normality test

fisher.multcomp

Pairwise comparisons using Fisher's exact test

deprecated

Deprecated functions in RVAideMemoire package

mqqnorm

Multivariate normality QQ-Plot

cramer.test

Cramer's association coefficient

fp.test

Fligner-Policello test

cv

Coefficient of variation

byf.mshapiro

Shapiro-Wilk test for factor levels

cramer

Cramer's association coefficient

ord.rw

Re-computation of an ordination using given row weights

overdisp.glmer

logis.noise

Creating a nls model for logistic regression from fitted values of a glm model

logis.fit

Graphical adujstment of a simple binary logistic regression to data

least.rect

Least rectangles linear regression

loc.slp

Slope of a hand-defined line

multtest.cor

Univariate correlation test for multiple variables

multinomial.theo.multcomp

Pairwise comparisons after an exact multinomial test for given probabilities

ind.contrib

Individual contributions in regression

multtest.gp

Univariate comparison of groups for multiple variables

multtest.gp.bin

Univariate comparison of groups for multiple binary variables

dummy

Dummy responses

chisq.theo.multcomp

Pairwise comparisons after a chi-squared test for given probabilities

cochran.qtest

Cochran's Q test

pcor

(Semi-)Partial correlation

pcor.test

Tests for (semi-)partial association/correlation between paired samples

pairwise.G.test

Pairwise comparisons for proportions using G-tests

pairwise.factorfit

Pairwise comparisons of groups displayed on a factorial map

plotsurvivors

Survivor curve

perm.bartlett.test

Permutation Bartlett's test of homogeneity of variances

predict.CDA.cv

Predict method for cross-validated CDA submodels

perm.anova

Permutation Analysis of Variance

pairwise.MVA.test

Pairwise permutation tests based on cross (model) validation

multinomial.test

Exact multinomial test

pairwise.var.test

Pairwise F tests

multinomial.multcomp

Pairwise comparisons after an exact multinomial test

pairwise.perm.var.test

Pairwise permutation F tests

predict.MVA.cv

Predict method for cross-validated submodels

predict.coadisc

Predict method for CDA

scat.cr

"Correlation" of variables to axes in MCA or mix analyses

pairwise.perm.t.test

Pairwise permutation t tests

rating.prob

Observed rating frequencies

pairwise.perm.manova

Pairwise permutation MANOVAs

elogis

Empirical logistic transformation

prop.multinom

Proportions and standard errors

reg.ci

Confidence intervals of a simple linear regression

to.dudi

Synthesis quality of multivariate analyses

spearman.cor.multcomp

Comparison of several Spearman's rank correlation coefficients

splitf

Divide into groups respecting relative proportions

pairwise.mood.medtest

Pairwise Mood's median tests

prop.multcomp

Pairwise comparisons after a test for given proportions

prop.bin.multcomp

Pairwise comparisons after a test for given probabilities

perm.var.test

Permutation F test to compare two variances

stand

Standardization of a data frame based on another data frame

test.multinom

Significance tests of coefficients (multinomial regression)

plotresid

Simple analysis of model residuals

mod

Mode

seq2

Sequence generation

spearman.ci

Confidence interval of a Spearman's rank correlation coefficient

se

Standard error

mood.medtest

Mood's median test

wald.ptheo.test

Wald test for comparison of a proportion to a theoretical value

wald.ptheo.multinom.test

Wald tests for comparison of proportions to theoretical values

prop.multinom.test

Wald tests for comparison of proportions

pairwise.CDA.test

Pairwise comparisons for CDA

p.beta

Rescaling of a [0,1] variable into the (0,1) interval (and vice-versa)

perm.cor.test

Permutation Pearson's correlation test

perm.t.test

Permutation Student's t-test

user.cont

User defined contrasts for EMMeans

wilcox.paired.multcomp

Non parametric pairwise comparisons for paired data

quasibinomial.QAIC

QAIC(c) calculation with GLMs of the quasi- family

rating.emmeans

EMMeans for Cumulative Link (Mixed) Models

wmean

Weighted arithmetic mean

wilcox.signtest

Wilcoxon sign test

G.multcomp

Pairwise comparisons after a G-test

G.test

G-test

G.theo.multcomp

Pairwise comparisons after a G-test for given probabilities

GPA.test

Significance test for GPA

G.bintest

G-test for binary variables

DIABLO.test

Significance test based on cross-validation

Anova.clm

Anova Tables for Cumulative Link (Mixed) Models

CDA.cv

Cross validation

DIABLO.cv

Cross validation

CDA.test

Significance test for CDA