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RVtests (version 1.2)

Rare Variant Tests

Description

Use multiple regression methods to test rare variants association with disease traits.

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Version

Install

install.packages('RVtests')

Monthly Downloads

13

Version

1.2

License

GPL (>= 2)

Maintainer

C Xu

Last Published

May 28th, 2013

Functions in RVtests (1.2)

RVtests-package

Rare Variants Tests
LASSO

LASSO for Rare Variant Tests
RR

Ridge Regression for RV Tests
PLS

Partial Least Squares Regression for RV tests
SPLS

Sparse PLS for RV Tests
count2geno

Transforming genotype counts to genotype codes
sample.cgeno

Genotype Counts dataset
PCR

Principal Components Regression for RV tests
geno2count

Transforming genotype codes matrix to genotype counts
VTWOD

VT and WOD for RV Tests