getEncoded

Convert from compressed binary to R numeric vector

R-based access to mass-spectrometry (MS) data. While many packages
exist to process MS data, many of these make it difficult to
access the underlying mass-to-charge ratio (m/z), intensity, and
retention time of the files
themselves. This package is designed to format MS data in a tidy fashion and
allows the user perform the plotting and analysis.

William Kumler

RaMS

R Access to Mass-Spec Data

Ricardo Cunha

Ethan Bass

getEncoded function

<dl><dt>mzint_nodes</dt>
<dd>The XML nodes containing the compressed binary string</dd>
<dt>compression_type</dt>
<dd>Compression type to be used by memDecompress</dd>
<dt>bin_precision</dt>
<dd>The bit (?) precision used by readBin</dd>
<dt>endi_enc</dt>
<dd>The byte order (?) of the string. For mzML this is always
"little" but mzXML can also be "big"</dd></dl>

Arguments

Convert from compressed binary to R numeric vector — getEncoded

<dl>

<dt>mzint_nodes</dt>
<dd>The XML nodes containing the compressed binary string</dd>


<dt>compression_type</dt>
<dd>Compression type to be used by memDecompress</dd>


<dt>bin_precision</dt>
<dd>The bit (?) precision used by readBin</dd>


<dt>endi_enc</dt>
<dd>The byte order (?) of the string. For mzML this is always
"little" but mzXML can also be "big"</dd>

</dl>

getEncoded: Convert from compressed binary to R numeric vector

Description

Usage

Value

Arguments