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This functions produces a barplot of differentially expressed genes derived by the function diffgenes
diffgenes
plotdiffgenes(z, gene)
Output of diffgenes
Valid gene name. Has to correspond to one of the rownames of the ndata slot of the SCseq object.
ndata
SCseq
None
# NOT RUN { sc <- SCseq(intestinalDataSmall) sc <- filterdata(sc) sc <- compdist(sc) sc <- clustexp(sc) sc <- findoutliers(sc) x <- diffgenes(sc,1,2) head(x$z) plotdiffgenes(x,names(x$z)[1]) # }
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