This functions plots cell labels into a two-dimensional t-SNE map or a Fruchterman-Rheingold graph layout of the singe-cell transcriptome data.
plotlabelsmap(object, labels = NULL, fr = FALSE)
SCseq
class object.
Vector of labels for all cells to be highlighted in the t-SNE map. The order has to be the same as for the
columns in slot ndata
of the SCseq
object. Default is NULL
and cell names are highlighted.
logical. If TRUE
then plot t-SNE map, else plot Fruchterman-Rheingold layout.
None