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RaceID (version 0.1.3)

plotlabelsmap: Plot labels in the t-SNE map

Description

This functions plots cell labels into a two-dimensional t-SNE map or a Fruchterman-Rheingold graph layout of the singe-cell transcriptome data.

Usage

plotlabelsmap(object, labels = NULL, fr = FALSE)

Arguments

object

SCseq class object.

labels

Vector of labels for all cells to be highlighted in the t-SNE map. The order has to be the same as for the columns in slot ndata of the SCseq object. Default is NULL and cell names are highlighted.

fr

logical. If TRUE then plot t-SNE map, else plot Fruchterman-Rheingold layout.

Value

None