plotBackVar

This function plots the variance against mean expression across all genes and a second order polynomial to the variance-mean dependence in log space. It also plots a local regression.

Application of 'RaceID' allows inference of cell types and prediction of lineage trees by he StemID2 algorithm. Herman, J.S., Sagar, Grün D. (2018) <DOI:10.1038/nmeth.4662>.

Dominic Grc3<bc>n

RaceID

Identification of Cell Types and Inference of Lineage Trees from
Single-Cell RNA-Seq Data

plotBackVar function

<dl><dt>x</dt>
<dd>List object returned by function <code>fitBackVar</code> or list object returned by function <code>pruneKnn</code>.</dd></dl>

Arguments

Function for plottinhg the background model of gene expression variability — plotBackVar

<dl>

<dt>x</dt>
<dd>List object returned by function <code>fitBackVar</code> or list object returned by function <code>pruneKnn</code>.</dd>

</dl>

plotBackVar: Function for plottinhg the background model of gene expression variability

Description

Usage

Value

Arguments

Examples