export_viewer

Export a map in a standalone html viewer

A toolkit for making antigenic maps from immunological assay data,
in order to quantify and visualize antigenic differences between different
pathogen strains as described in
Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World
Health Organization influenza vaccine strain selection process. Additional
functions allow for the diagnostic evaluation of antigenic maps and an
interactive viewer is provided to explore antigenic relationships amongst
several strains and incorporate the visualization of associated genetic
information.

S. Wilks

Racmacs

Antigenic Cartography Macros

Sam Wilks

export_viewer function

<dl><dt>map</dt>
<dd>The acmap object</dd>
<dt>file</dt>
<dd>File to save HTML into</dd>
<dt>selfcontained</dt>
<dd>Whether to save the HTML as a single self-contained file
(with external resources base64 encoded) or a file with external resources
placed in an adjacent directory.</dd>
<dt>...</dt>
<dd>Further parameters to <code>view()</code></dd></dl>

Arguments

Export the map viewer — export_viewer

<dl>

<dt>map</dt>
<dd>The acmap object</dd>


<dt>file</dt>
<dd>File to save HTML into</dd>


<dt>selfcontained</dt>
<dd>Whether to save the HTML as a single self-contained file
(with external resources base64 encoded) or a file with external resources
placed in an adjacent directory.</dd>


<dt>...</dt>
<dd>Further parameters to <code>view()</code></dd>

</dl>

export_viewer: Export the map viewer

Description

Usage

Value

Arguments

See Also