getOptimization

Gets the details associated with the currently selected or specified acmap
optimization as a list.

A toolkit for making antigenic maps from immunological assay data,
in order to quantify and visualize antigenic differences between different
pathogen strains as described in
Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World
Health Organization influenza vaccine strain selection process. Additional
functions allow for the diagnostic evaluation of antigenic maps and an
interactive viewer is provided to explore antigenic relationships amongst
several strains and incorporate the visualization of associated genetic
information.

S. Wilks

Racmacs

Antigenic Cartography Macros

Sam Wilks

getOptimization function

<dl><dt>map</dt>
<dd>The acmap data object</dd>
<dt>optimization_number</dt>
<dd>The optimization data to access</dd></dl>

Arguments

Get optimization details from an acmap object — getOptimization

<dl>

<dt>map</dt>
<dd>The acmap data object</dd>


<dt>optimization_number</dt>
<dd>The optimization data to access</dd>

</dl>

getOptimization: Get optimization details from an acmap object

Description

Usage

Value

Arguments

See Also