Racmacs (version 1.2.9)

pointStress: Get individual point stress

Description

Functions to get stress associated with individual points in a map.

Usage

agStress(map, antigens = TRUE, optimization_number = 1)
srStress(map, sera = TRUE, optimization_number = 1)
srStressPerTiter(map, sera = TRUE, optimization_number = 1)
agStressPerTiter(map, antigens = TRUE, optimization_number = 1)

Value

A numeric vector of point stresses

Arguments

map

The acmap data object

antigens

Which antigens to check stress for, specified by index or name (defaults to all antigens).

optimization_number

The optimization number

sera

Which sera to check stress for, specified by index or name (defaults to all sera).

See Also

See mapStress() for getting the total map stress directly.

Other map diagnostic functions: agCohesion(), bootstrapBlobs(), bootstrapMap(), checkHemisphering(), dimensionTestMap(), logtiterTable(), map-table-distances, mapBootstrapCoords, mapDistances(), mapRelaxed(), mapResiduals(), ptBootstrapBlob, ptBootstrapCoords(), ptLeverage, ptTriangulationBlob, recalculateStress(), stressTable(), tableColbases(), tableDistances(), triangulationBlobs(), unstableMaps

Other functions relating to map stress calculation: logtiterTable(), mapDistances(), mapResiduals(), recalculateStress(), stressTable(), tableColbases(), tableDistances()