sortOptimizations

Sorts all the optimization runs for a given map object by stress
(lowest to highest). Note that this is done by default when running
<code>optimizeMap()</code>.

A toolkit for making antigenic maps from immunological assay data,
in order to quantify and visualize antigenic differences between different
pathogen strains as described in
Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World
Health Organization influenza vaccine strain selection process. Additional
functions allow for the diagnostic evaluation of antigenic maps and an
interactive viewer is provided to explore antigenic relationships amongst
several strains and incorporate the visualization of associated genetic
information.

S. Wilks

Racmacs

Antigenic Cartography Macros

Sam Wilks

sortOptimizations function

<dl><dt>map</dt>
<dd>The acmap object</dd></dl>

Arguments

Sort optimizations by stress — sortOptimizations

<dl>

<dt>map</dt>
<dd>The acmap object</dd>

</dl>

sortOptimizations: Sort optimizations by stress

Description

Usage

Value

Arguments

See Also