srHomologousAgs

srHomologousAgs&lt;-

Get and set indices of homologous antigens to sera in an antigenic map

A toolkit for making antigenic maps from immunological assay data,
in order to quantify and visualize antigenic differences between different
pathogen strains as described in
Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World
Health Organization influenza vaccine strain selection process. Additional
functions allow for the diagnostic evaluation of antigenic maps and an
interactive viewer is provided to explore antigenic relationships amongst
several strains and incorporate the visualization of associated genetic
information.

S. Wilks

Racmacs

Antigenic Cartography Macros

Sam Wilks

srHomologousAgs function

<dl><dt>map</dt>
<dd>An acmap object</dd>
<dt>value</dt>
<dd>A list, where each entry is a vector of indices for homologous
antigens, or a length 0 vector where no homologous antigen is present</dd></dl>

Arguments

Get and set homologous antigens for sera — srHomologousAgs

<dl>

<dt>map</dt>
<dd>An acmap object</dd>


<dt>value</dt>
<dd>A list, where each entry is a vector of indices for homologous
antigens, or a length 0 vector where no homologous antigen is present</dd>

</dl>

srHomologousAgs: Get and set homologous antigens for sera

Description

Usage

Value

Arguments

See Also