Get a stress table from an acmap
stressTable(map, optimization_number = 1)Returns a matrix of stresses, showing how much each antigen and sera measurement contributes to stress in the selected or specified optimization.
The acmap object
The optimization number for which to calculate stresses
Other map diagnostic functions:
agCohesion(),
bootstrapBlobs(),
bootstrapMap(),
checkHemisphering(),
dimensionTestMap(),
logtiterTable(),
map-table-distances,
mapBootstrapCoords,
mapDistances(),
mapRelaxed(),
mapResiduals(),
pointStress,
ptBootstrapBlob,
ptBootstrapCoords(),
ptLeverage,
ptTriangulationBlob,
recalculateStress(),
tableColbases(),
tableDistances(),
triangulationBlobs(),
unstableMaps
Other functions relating to map stress calculation:
logtiterTable(),
mapDistances(),
mapResiduals(),
pointStress,
recalculateStress(),
tableColbases(),
tableDistances()