subsetMap

Subset an antigenic map to contain only specified antigens and sera

A toolkit for making antigenic maps from immunological assay data,
in order to quantify and visualize antigenic differences between different
pathogen strains as described in
Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World
Health Organization influenza vaccine strain selection process. Additional
functions allow for the diagnostic evaluation of antigenic maps and an
interactive viewer is provided to explore antigenic relationships amongst
several strains and incorporate the visualization of associated genetic
information.

S. Wilks

Racmacs

Antigenic Cartography Macros

Sam Wilks

subsetMap function

<dl><dt>map</dt>
<dd>The antigenic map object</dd>
<dt>antigens</dt>
<dd>Antigens to keep, defaults to all.</dd>
<dt>sera</dt>
<dd>Sera to keep, defaults to all.</dd></dl>

Arguments

Subset an antigenic map — subsetMap

<dl>

<dt>map</dt>
<dd>The antigenic map object</dd>


<dt>antigens</dt>
<dd>Antigens to keep, defaults to all.</dd>


<dt>sera</dt>
<dd>Sera to keep, defaults to all.</dd>

</dl>

subsetMap: Subset an antigenic map

Description

Usage

Value

Arguments

See Also