radiationInfo

rSet

Computational tool box for radio-genomic analysis which integrates
radio-response data, radio-biological modelling and comprehensive cell line
annotations for hundreds of cancer cell lines. The 'RadioSet' class enables
creation and manipulation of standardized datasets including information
about cancer cells lines, radio-response assays and dose-response indicators.
Included methods allow fitting and plotting dose-response data using
established radio-biological models along with quality control to validate
results. Additional functions related to fitting and plotting dose response
curves, quantifying statistical correlation and calculating area under the
curve (AUC) or survival fraction (SF) are included. For more details please
see the included documentation, references, as well as:
Manem, V. et al (2018) <doi:10.1101/449793>.

Benjamin HaibeKains

RadioGx

Analysis of Large-Scale Radio-Genomic Data

Venkata Manem

Petr Smirnov

Ian Smith

Meghan Lambie

Christopher Eeles

Scott Bratman

Benjamin Haibe-Kains

radiationInfo function

radiationInfo Generic — radiationInfo

radiationInfo Generic

radiationInfo: radiationInfo Generic

Description

Usage

Arguments

Value

Examples