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RcmdrPlugin.RMTCJags (version 1.0-2)

database-structure: How to format database for analysis?

Description

Manual to build database for RcmdrPlugin.RMTCJags

Arguments

Details

Fixed Effect Model (FE Model), Random Effect Model (RE Model) Ignoring multi-arm trials and Random Effect Model (RE Model) for 2- and 3-arms trials:

A database with six (6) variables: s -> Study index (Number) t -> Treatment index (Number) r -> Number of cases on the treatment n -> Total population on the treatment b -> Baseline treatment m -> Arm index (Only needed on RE Model for 2- and 3-arms trials), where 1 is the baseline treatment and 2,..,n are for the other treatments

Each line on the database is a treatment of a trial (study), for example:

s t r n b
m 1 1 40 100
1 1 1 3 15
90 1 2 1 4
10 75 1 3 ...
... ... ... ... ...
4 2 50 200 2
1 4 4 60 150
2 2 s t r

Random Effect Model (RE Model) for multi-arm trial:

A database with N*3 + 1 columns, where N is the highest number of arms from a trial collection.

t[1,..N,] -> Treatment index r[1,..N,] -> Number of cases on the treatment n[1,..N,] -> Total population on the treatment na -> Number of arms on the study

Each line on the database is a trial. For example, if we collect 10 trials and after check them we have the biggest trial with 5 arms our database structure is:

t[1,] t[2,] t[3,] t[4,] t[5,] r[1,] r[2,] r[3,] r[4,] r[5,] n[1,] n[2,] n[3,] n[4,] n[5,]
na 1 2 3 4 5 20 30 10 5 14 100 90 80 110
50 5 1 3 4 5 NA 10 50 60 15 NA 150 200 340
165 1 4 2 4 5 NA NA 40 70 80 NA NA 70 190
500 1 1 3 ... ... ... ... ... ... ... ... ... ... ...
... ... ... ... ... 3 4 NA NA NA 80 90 NA NA NA
250 580 1 1 1 2 t[1,] t[2,] t[3,] t[4,] t[5,] r[1,] r[2,] r[3,] r[4,]