Rcolombos (version 2.0.2)

parseCompendium: This method allows importing the full compendium for the selected organism from a local file

Description

This method allows importing the full compendium for the selected organism from a local file

Usage

parseCompendium(destfile)

Arguments

destfile

A character containing the full path of the downloaded file

Value

A list containing two or three data.frames.In case switchVersion is equal to 2:

exprdata

the full compendium for the selected organism

condannot

The condition annotation for the selected organism

In case switchVersion is equal to 3:

exprdata

the full compendium for the selected organism

refannot

The condition annotation for the reference contrasts

testannot

The condition annotation for the test contrasts

References

http://colombos.net

Examples

## Not run: 
# library('Rcolombos')
# mtube <- parseCompendium("mtube_compendium_data.zip")
# ## End(Not run)