Unlimited learning, half price | 50% off

Last chance! 50% off unlimited learning

Sale ends in

Learn R Programming
Rcpi (version 1.8.0)

extractProtAAC: Amino Acid Composition Descriptor

Description

Amino Acid Composition Descriptor

Usage

extractProtAAC(x)

Arguments

x
A character vector, as the input protein sequence.

Value

A length 20 named vector

Details

This function calculates the Amino Acid Composition descriptor (Dim: 20).

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractProtDC and extractProtTC for Dipeptide Composition and Tripeptide Composition descriptors.

Examples

Run this code
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtAAC(x)

Run the code above in your browser using DataLab