Rcpi (version 1.8.0)

extractProtTC: Tripeptide Composition Descriptor

Description

Tripeptide Composition Descriptor

Usage

extractProtTC(x)

Arguments

x

A character vector, as the input protein sequence.

Value

A length 8000 named vector

Details

This function calculates the Tripeptide Composition descriptor (Dim: 8000).

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractProtAAC and extractProtDC for Amino Acid Composition and Dipeptide Composition descriptors.

Examples

x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtTC(x)