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Rcpi (version 1.8.0)

getSeqFromUniProt: Retrieve Protein Sequence from the UniProt Database

Description

Retrieve Protein Sequence from the UniProt Database

Usage

getSeqFromUniProt(id, parallel = 5)

Arguments

id
A character vector, as the protein ID.
parallel
An integer, the parallel parameter, indicates how many process the user would like to use for retrieving the data (using RCurl), default is 5. For regular cases, we recommend a number less than 20.

Value

A list, each component contains one of the protein represented by amino acid sequence(s).

Details

This function retrieves protein represented by amino acid sequence from the UniProt database.

References

UniProt. http://www.uniprot.org/

UniProt REST API Documentation. http://www.uniprot.org/faq/28

See Also

See getFASTAFromUniProt for retrieving protein sequence in FASTA format from the UniProt database.

Examples

Run this code

id = c('P00750', 'P00751', 'P00752')
getSeqFromUniProt(id)

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