batchDecompose

Creates composition lookup table for a set of SNOMED CT concepts
and exports the results to a file

Functions and methods for manipulating 'SNOMED CT'
concepts. The package contains functions for loading the 'SNOMED CT'
release into a convenient R environment, selecting 'SNOMED CT'
concepts using regular expressions, and navigating the 'SNOMED CT'
ontology. It provides the 'SNOMEDconcept' S3 class for a vector of
'SNOMED CT' concepts (stored as 64-bit integers) and the
'SNOMEDcodelist' S3 class for a table of concepts IDs with
descriptions. The package can be used to construct sets of
'SNOMED CT' concepts for research (<doi:10.1093/jamia/ocac158>).
For more information about 'SNOMED CT' visit
<https://www.snomed.org/>.

Anoop Shah

Rdiagnosislist

Manipulate SNOMED CT Diagnosis Lists

batchDecompose function

<dl><dt>conceptIds</dt>
<dd>SNOMED CT concept IDs for creating decompositions</dd>
<dt>CDB</dt>
<dd>concept database environment, containing a table called
FINDINGS</dd>
<dt>output_filename</dt>
<dd>filename of output file</dd>
<dt>SNOMED</dt>
<dd>environment containing a SNOMED dictionary</dd>
<dt>...</dt>
<dd>other arguments to pass through to decompose</dd></dl>

Arguments

Creates a set of lookups for SNOMED composition — batchDecompose

<dl>

<dt>conceptIds</dt>
<dd>SNOMED CT concept IDs for creating decompositions</dd>


<dt>CDB</dt>
<dd>concept database environment, containing a table called
FINDINGS</dd>


<dt>output_filename</dt>
<dd>filename of output file</dd>


<dt>SNOMED</dt>
<dd>environment containing a SNOMED dictionary</dd>


<dt>...</dt>
<dd>other arguments to pass through to decompose</dd>

</dl>

batchDecompose: Creates a set of lookups for SNOMED composition

Description

Usage

Value

Arguments

See Also