Fits a log-linear model for collapsed contingency tables.
mygllm(y, s, X, maxit = 1000, tol = 1e-05, E = rep(1, length(s)))
Vector of observed cell frequencies.
Scatter matrix. s[i] is the cell in the observed array that corresponds to cell i in the full array.
Design matrix.
Maximum number of iterations.
Convergence parameter.
Full contingency table. Should be initialized with either ones or a priori estimates.
Estimated full contingency table.
This is an implementation and extension of the algorithm published by Haber (1984). It also incorporates ideas of David Duffy (see references).
A priori estimates of the full contingency table can be given as
start values by argument E
. This can reduce
execution time significantly.
Michael Haber, Algorithm AS 207: Fitting a General Log-Linear Model, in: Applied Statistics 33 (1984) No. 3, 358--362.
David Duffy: gllm: Generalised log-linear model. R package version 0.31. see http://www.qimr.edu.au/davidD/#loglin
emWeights
, which makes use of log-linear fitting for
weight calculation.