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RevEcoR (version 0.99.2)

anno.species: Annotation profiles of seven well-studied oral species

Description

A dataset containing the the KEGG orthology annotation profiles of seven oral species which was downloaded from the Integrated Microbial Genomes (IMG).

Arguments

format

A list with seven elements and each elements represents the annotation profile of the species

source

img.jgi.doe.gov/

Details

This datasets constains the KEGG orthology annotation information of seven oral species whose interactions were carefully and well characterized. The human oral microbiota is relatively #' well described. The name of these seven species is: Aggregatibacter, actinomycetemcomitans D7S-1, Fusobacterium nucleatum polymorphum ATCC 10953, Porphyromonas gingivalis ATCC 33277, Streptococcus gordonii str. Challis substr. CH1, Streptococcus oralis SK23, ATCC 35037, Veillonella atypica ACS-134-V-Col7a. For more annotation information on these species, see img.jgi.doe.gov/.
  • Aa, Aggregatibacter actinomycetemcomitans D7S-1
  • Ao, Actinomyces oris K20
  • Fn, Fusobacterium nucleatum polymorphum ATCC 10953
  • Pg, Porphyromonas gingivalis ATCC 33277
  • Sg, Streptococcus gordonii str. Challis substr. CH1
  • So, Streptococcus oralis SK23, ATCC 35037
  • Va, Veillonella atypica ACS-134-V-Col7a