getRawDataFilenames-methods

getRawDataFilenames,ISATab,logical-method

getRawDataFilenames


 ~~ Methods for function <code>getRawDataFilenames</code> in package <span class="pkg">Risa</span> ~~\
To retrieve the raw data filenames in the ISATab dataset.


methods

 ~~ other possible keyword(s) ~~ 

The Investigation / Study / Assay (ISA) tab-delimited
format is a general purpose framework with which to collect and communicate
complex metadata (i.e. sample characteristics, technologies used, type
of measurements made) from experiments employing a combination of
technologies, spanning from traditional approaches to high-throughput
techniques. Risa allows to access metadata/data in ISA-Tab format and
build Bioconductor data structures. Currently, data generated from microarray,
flow cytometry and metabolomics-based (i.e. mass spectrometry) assays are supported.
The package is extendable and efforts are undergoing to support metadata associated to proteomics assays.

Alejandra GonzalezBeltran

Risa

Converting experimental metadata from ISA-tab into Bioconductor data structures

getRawDataFilenames-methods function

<dl> <dt><code>signature(.Object = "ISATab", full.path = "logical")</code></dt><dd>
Retrieves the raw data filenames in the ISATab dataset given an object from the <code>ISATab-class</code> and a boolean value indicating if the filenames are retrieved with their full path or not.
</dd> </dl>

Methods

~~ Methods for function <code>getRawDataFilenames</code> in package <pkg>Risa</pkg> ~~\
To retrieve the raw data filenames in the ISATab dataset.

getRawDataFilenames-methods: Methods for Function `getRawDataFilenames` in Package Risa

Description

Arguments

Methods