Retrieve data from LabKey Server
Exchange data between LabKey Server and R
Returns the folder path associated with a session
Creates and returns a LabKey Server session
labkey.acceptSelfSignedCerts
Convenience method to configure Rlabkey connections to accept self-signed certificates
Returns the current set of Curl options that are being used in the existing session
Delete rows of data from a LabKey database
Returns an object representing a LabKey schema
Open the Rlabkey Users Guide
Get related data fields that are available to include in a query on a given query object
Returns the metadata for an existing LabKey domain
labkey.domain.createAndLoad
Create a new LabKey domain and load data
Delete a LabKey domain
labkey.domain.createConditionalFormatQueryFilter
Create a conditional format query filter
labkey.domain.createIndices
Helper function to create a domain design indices list
labkey.experiment.createRun
Create an experiment run object
labkey.experiment.createMaterial
Create an experiment material object
labkey.experiment.saveBatch
Saves a modified experiment batch
Updates an existing LabKey domain
Import rows of data into a LabKey Server
labkey.domain.inferFields
Infer field metadata from a data frame
labkey.experiment.saveRuns
Saves Runs.
Retrieve data from a LabKey Server using SQL commands
Helper function to get the HTTP request options for a specific method type.
Insert new rows of data into a LabKey Server
Retrieve a list of available schemas from a labkey database
Get effective module property value
labkey.domain.createConditionalFormat
Create a conditional format data frame
labkey.pipeline.getProtocols
Gets the protocols that have been saved for a particular pipeline
labkey.rstudio.isInitialized
Check valid rlabkey session
labkey.rstudio.initSession
Initialize a RStudio session for LabKey integration using a time one request id
labkey.pipeline.getPipelineContainer
Gets the container in which the pipeline is defined
labkey.rstudio.initRStudio
Initialize a RStudio session for LabKey integration
labkey.rstudio.initReport
Initialize a RStudio session for LabKey R report source editing
labkey.provenance.createProvenanceParams
Create provenance parameter object
labkey.provenance.startRecording
Start a provenance recording
labkey.domain.createDesign
Helper function to create a domain design data structure
Retrieve data from a labkey database
Set the default parameters used for all http or https requests
Retrieve detailed information on a LabKey query
Helper function to enable/disable debug mode.
labkey.webdav.downloadFolder
Recursively download a folder via WebDAV
Get the default baseUrl parameter used for all http or https requests
labkey.getDefaultViewDetails
Retrieve the fields of a LabKey query view
labkey.security.createContainer
Creates a new container, which may be a project, folder, or workbook, on the server
Modify the current set of Curl options that are being used in the existing session
Tests if a path exists on a LabKey Server via WebDAV
Create a folder via WebDAV
Set module property value
Upload a file via WebDAV
labkey.security.getContainers
Returns information about the specified container
labkey.transform.getRunPropertyValue
Assay transform script helper function to get a run property value from a data.frame
labkey.security.impersonateUser
Start impersonating a user
Download a file via WebDAV
Retrieve a list of available named views defined on a query in a schema
Builds filters to be used in labkey.selectRows and getRows
Build a file path to data on a remote machine
Retrieve a list of available queries for a specified LabKey schema
labkey.domain.FILTER_TYPES
Provide comparator access
Retrieve a list of folders accessible to the current user
labkey.pipeline.startAnalysis
Start an analysis of a set of files using a pipeline
Retrieve detailed information on a LabKey query
Call the whoami API
labkey.security.moveContainer
Moves an existing container, which may be a folder or workbook
Returns an object representing a LabKey schema
labkey.security.stopImpersonating
Stop impersonating a user
labkey.pipeline.getFileStatus
Gets the protocol file status for a pipeline
Bulk import an R data frame into a LabKey Server table using file import.
labkey.experiment.SAMPLE_DERIVATION_PROTOCOL
Constant for the Simple Derivation Protocol
Create a new LabKey domain
labkey.rstudio.saveReport
Update RStudio report source back to LabKey
labkey.experiment.createData
Create an experiment data object
labkey.provenance.addRecordingStep
Add a step to a provenance recording
List the available schemas
labkey.provenance.stopRecording
Stop a provenance recording
List the contents of a LabKey Server folder via WebDAV
Save an assay batch object to a labkey database
labkey.security.deleteContainer
Deletes an existing container, which may be a project, folder, or workbook
labkey.transform.readRunPropertiesFile
Assay transform script helper function to read a run properties file
Delete all rows from a table
Update existing rows of data in a labkey database
List the available folder paths
List the projects available at a given LabKey Server address
Create a folder via WebDAV
Deletes the provided file/folder on a LabKey Server via WebDAV