RnBeads (version 1.4.0)

dpval,RnBeadSet-method: dpval-methods

Description

Extract detection p-values from an object of RnBeadSet class.

Usage

"dpval"(object, type = "sites", row.names = FALSE)

Arguments

object

RnBeadSet or RnBeadRawSet object

type

character singleton. If sites detection p-values per each available site is returned. Otherwise should be one of region types for for which the summarized p-values are available

row.names

Flag indicating of row names are to be generated in the result.

Value

detection p-values available for the dataset in the form of a matrix.

Examples

library(RnBeads.hg19)
data(small.example.object)
dp<-dpval(rnb.set.example, row.names=TRUE)
head(dp)