RnBeads (version 1.4.0)

rnb.RnBSet.to.GRangesList: rnb.RnBSet.to.GRangesList

Description

convert an RnBSet object to a GRangesList object

Usage

rnb.RnBSet.to.GRangesList(rnb.set, reg.type = "sites", return.regular.list = FALSE)

Arguments

rnb.set

Object of class RnBSet

reg.type

region type to be converted

return.regular.list

flag indicating whether a regular list object should be returned instead of a GRangesList. Might improve performance in some cases

Value

a GRangesList or list object with one list element (GRanges) for each sample in rnb.set

Examples

library(RnBeads.hg19)
data(small.example.object)
logger.start(fname=NA)
result <- rnb.RnBSet.to.GRangesList(rnb.set.example)