RnBeads (version 1.4.0)

rnb.get.reliability.matrix: rnb.get.reliability.matrix

Description

Gets a matrix of reliability indications for every measurement in the given dataset.

Usage

rnb.get.reliability.matrix(rnb.set, row.names = FALSE)

Arguments

rnb.set

Methylation dataset as an object of type inheriting RnBSet.

row.names

Flag indicating of row names are to be generated in the result.

Value

logical matrix in which every row corresponds to a CpG site or probe and every column - to a patient. If the dataset does not contain coverage or detection p-value information, the returned value is NULL.

Examples

library(RnBeads.hg19)
data(small.example.object)
rnb.options(identifiers.column = "Sample_ID")
str(rnb.get.reliability.matrix(rnb.set.example))