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RnBeads (version 1.4.0)

rnb.plot.ct.heatmap: rnb.plot.ct.heatmap

Description

Plot contributions of the cell types

Usage

rnb.plot.ct.heatmap(ct.obj, type = "nonnegative", writeToFile = FALSE, ...)

Arguments

ct.obj
Object of class CellTypeInferenceResult as returned by rnb.execute.ct.estimation.
type
Type of cell type contributions to plot.
writeToFile
If TRUE, the plot will be written to a file.
...
Other arguments passed to createReportPlot.

Value

if writeToFile=TRUE an object of class ReportPlot, or the protted matrix otherwise

Details

The cell type contributions are visualized as a heatmap