RnBeads (version 1.4.0)

rnb.plot.num.sites.covg: rnb.plot.num.sites.covg

Description

plot the number of sites vs median and other percentiles of coverage

Usage

rnb.plot.num.sites.covg(rnbs, addSampleNames = (length(samples(rnbs)) < 100), bar.percentiles = c(0.25, 0.75))

Arguments

rnbs

RnBiseqSet object

addSampleNames

should the sample names be added to the plot

bar.percentiles

the percentiles to be used for the error bars. Must be a vector of length 2 of which the first two elements will be used

Value

plot as an object of type ggplot