RnBeads (version 1.4.0)

summarized.regions,RnBSet-method: summarized.regions-methods

Description

Gets the genomic annotations for which methylation data is present in the RnBSet object.

Usage

"summarized.regions"(object)

Arguments

object

Methylation dataset of interest.

Value

character vector listing all genomic annotations summarized in the given dataset. If the dataset contains methylation in sites only, an empty vector is returned.

See Also

summarize.regions for calculating region-wise methylation in a dataset; rnb.set.annotation for adding or replacing a region annotation table

Examples

library(RnBeads.hg19)
data(small.example.object)
summarized.regions(rnb.set.example)