RnaSeqSampleSize (version 1.4.2)

convertIdOneToOne: convertId

Description

A function to convert ID based on the biomaRt package.

Usage

convertIdOneToOne(x, dataset = "hsapiens_gene_ensembl", filters = "uniprot_swissprot", attributes = c(filters, "entrezgene"), verbose = FALSE)

Arguments

x

the Ids need to be converted.

dataset

Dataset you want to use. To see the different datasets available within a biomaRt you can e.g. do: mart = useMart('ensembl'), followed by listDatasets(mart).

filters

Filters (one or more) that should be used in the query. A possible list of filters can be retrieved using the function listFilters.

attributes

Attributes you want to retrieve. A possible list of attributes can be retrieved using the function listAttributes.

verbose

Logical. Indicate report extra information on progress or not.

Value

A converted ID character with the same order of parameter x.

Details

A function to convert ID based on the biomaRt package..

Examples

x<-c("Q04837","P0C0L4","P0C0L5","O75379","Q13068","A2MYD1","P60709","P30462","P30475","P30479")
convertIdOneToOne(x,filters="uniprot_swissprot",verbose=TRUE)