RoME (version 0.2.4)

check_species_TBTC: Function checking if all the target species in the catch data table (TB) are in Biological data table (TC)

Description

This function verifies the presence of the target species (that is a subset of the all the species caught, reported in TB), in the TC table, where additional information (apart from number and weight) are collected.

Usage

check_species_TBTC(ResultTB,ResultTC,year,DataSpecies,wd,suffix)

Value

The function returns always TRUE, because the outcome of the function is a warning that does not lock the execution of the 'RoME' checks.

Arguments

ResultTB

Catch data table(TB).

ResultTC

Biological data table (TC).

year

reference year for the analysis

DataSpecies

Information related to target species.

wd

Working directory selected by the user.

suffix

Suffix string of the Logfile.

Author

I. Bitetto, W. Zupa

Details

This function gives a warning message, thus the execution is not stopped when some target species are lacking in TC; the user is informed in the Logfile.

References

Anonymus. 2017. MEDITS-Handbook. Version n. 9. MEDITS Working Group. 106 pp.

Examples

wd=tempdir()
suffix = "2020-03-05_time_h17m44s55"
year=2007
ResultTB=RoME::TB
ResultTC=RoME::TC
check_species_TBTC(ResultTB,ResultTC,year,RoME::DataTargetSpecies,wd,suffix)