Rqc (version 1.6.2)

subsetByPair: Subset RqcResultSet object by pair files.

Description

This function subsets RqcResultSet object function by pair files.

Usage

subsetByPair(rqcResultSet, pair)

Arguments

rqcResultSet

list of RqcResultSet objects created by rqc and rqcQA functions.

pair

index of the pair

Value

list of RqcResultSet objects from only one pair.

Examples

checkpoint("Rqc", path=system.file(package="Rqc", "extdata"), {
  folder <- system.file(package="ShortRead", "extdata/E-MTAB-1147")
  files <- list.files(full.names=TRUE, path=folder)
  rqcResultSet <- rqcQA(files, pair=c(1,1), workers=1)
}, keep="rqcResultSet")
perFileInformation(subsetByPair(rqcResultSet, 1))