SARTools (version 1.6.2)

countsBoxplots: Box-plots of (normalized) counts distribution per sample

Description

Box-plots of raw and normalized counts distributions per sample to assess the effect of the normalization

Usage

countsBoxplots(object, group, col = c("lightblue", "orange",
  "MediumVioletRed", "SpringGreen"), outfile = TRUE)

Arguments

object

a DESeqDataSet object from DESeq2 or a DGEList object from edgeR

group

factor vector of the condition from which each sample belongs

col

colors of the boxplots (one per biological condition)

outfile

TRUE to export the figure in a png file

Value

A file named countsBoxplots.png in the figures directory containing boxplots of the raw and normalized counts