Data Engineering and BI courses are free this week!
Plots to assess the estimations of the size factors
diagSizeFactorsPlots(dds, group, col = c("lightblue", "orange",
"MediumVioletRed", "SpringGreen"), outfile = TRUE, plots = c("diag",
"sf_libsize"))a DESeqDataSet object
factor vector of the condition from which each sample belongs
colors for the plots
TRUE to export the figure in a png file
vector of plots to generate
Two files in the figures directory: diagSizeFactorsHist.png containing one histogram per sample and diagSizeFactorsTC.png for a plot of the size factors vs the total number of reads